Awesome List Updates on May 27, 2018
5 awesome lists updated today.
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1. Awesome Biological Visualizations
Cancer
- COSMIC Cancer Browser - Browse COSMIC data by tissue type and histology.
- UCSC Xena - Explore functional genomic data sets for correlations between genomic and/or phenotypic variables.
- iCoMut Beta for FireBrowse - Interactive exploration of mutation rates, mutation signatures, clinical data, gene mutations.
- MAGI - Visualization and collaborative annotation of genomic aberrations.
- Race, Gender, and Age in TCGA - An interactive visualization of patient gender, race, and age in The Cancer Genome Atlas (TCGA) dataset.
- OASISPRO - Omics analysis tool for clinical phenotype prediction.
Genomics
- UCSC Genome Browser - Interactively visualize genomic data.
- Ensembl - A genome browser for vertebrate genomes that supports research in comparative genomics, evolution, sequence variation and transcriptional regulation.
- IMP: Integrative Multi-species Prediction - Analyze your experimental results in the functional context of gene-gene networks from multiple organisms.
3D Genomics
- HiGlass - A tool for exploring genomic contact matrices and tracks.
- Delta - An integrative analysis and visualization platform for 3D genome.
- Juicebox - Visualization for Hi-C data.
Metagenomics
- Metaviz - Interactive statistical and visual analysis of metagenomic data.
- Malaria Cell Atlas - Explore how genes are expressed across more than 500 individual Plasmodium parasites.
Epigenomics
- Epiviz - Interactive visual analytics for functional genomics data.
- WashU Epigenome Browser - Displays many sequencing-based data sets across all or part of the genome, on specific gene sets or pathways, and in the context of their metadata.
- Clustergrammer CCLE Explorer - Browse relative mRNA expression data for cancer cell lines from the Cancer Cell Line Encyclopedia (CCLE) by tissue of origin using Clustergrammer.
Proteomics
- EzMol - Visualisation and image production of protein and nucleic acid structures.
- LiteMol - Visualization of large-scale macromolecular structure data.
(Non-spatial) Transcriptomics
- L1000FWD - Large-scale visualization of drug-induced transcriptomic signatures.
Populations / Gene expression matrices
- Nextstrain - Real-time tracking of virus evolution.
- Institute for Health Metrics and Evaluation - Visualizations of disease worldwide.
- Lifespans - Visualization of the lifespans of multiple species.
- Life Expectancy - Life expectancies around the world, 1960 to 2009.
2. Awesome Lit
Videos / Other Tools
3. Awesome Serverless
Talks
- Serverless, Not So FaaS - CloudNativeCon 2018 Keynote by Kelsey Hightower, Kubernetes Community Member, Google.
4. Awesome Ember
Packages / Books
Packages / Tutorials
5. Awesome Minecraft
Websites / Forums
- Minecraft Forums - Official community forums, a great place to talk about the game.
- Planet Minecraft - Creative community fansite.
Mod Loaders / Archives
- Minecraft Forge (⭐6.8k) - Modifications to the Minecraft base files to assist in compatibility between mods.
- liteloader - A lightweight mod loader for Minecraft designed to provide simple, high-performance and reliable loader functionality for mods which don't need to modify game mechanics.
Mods / Performance
- Optifine - OptiFine is a Minecraft optimization mod.
Mods / Skins And Capes
- Universal Skin Mod (⭐26) - A Minecraft Forge Mod allows players load custom skin & cape textures.
Softwares / Utilities
- Minecraft Command Helper (⭐25) - A WPF Program about generate Minecraft Command (with NBT data). (Windows Only)
Development / Launchers
- FML Mod Development Tutorial - (Chinese) Minecraft 1.8.9 FML Mod Development Tutorial.
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- Next: May 26, 2018