Awesome List Updates on May 03, 2018

9 awesome lists updated today.

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1. Awesome Cheminformatics

Applications / Visualization

• PyMOL - Python-enhanced molecular graphics tool.

• Jmol - Browser-based HTML5 viewer and stand-alone Java viewer for chemical structures in 3D.

• VMD - Molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting.

Applications / Command Line Tools

• Open Babel - Chemical toolbox designed to speak the many languages of chemical data.

Applications / Docking

• AutoDock Vina - Molecular docking and virtual screening.

• smina - Customized AutoDock Vina to better support scoring function development and high-performance energy minimization.

Libraries / General Purpose

• RDKit - Collection of cheminformatics and machine-learning software written in C++ and Python.

• Indigo (⭐270) - Universal molecular toolkit that can be used for molecular fingerprinting, substructure search, and molecular visualization written in C++ package, with Java, C#, and Python wrappers.

• ChemmineR - Cheminformatics package for analyzing drug-like small molecule data in R.

Libraries / Format Checking

• MolVS (⭐143) - Molecule validation and standardization based on RDKit.

Libraries / Visualization

• Kekule.js - Front-end JavaScript library for providing the ability to represent, draw, edit, compare and search molecule structures on web browsers.

Libraries / Molecular Descriptors

• mordred (⭐317) - Molecular descriptor calculator based on RDKit.

• mol2vec (⭐239) - Vector representations of molecular substructures.

Libraries / Web APIs

• webchem (⭐153) - Chemical Information from the Web.

• Beaker (⭐47) - RDKit and OSRA in the Bottle on Tornado.

Libraries / Molecular Dynamics

• Gromacs - Molecular dynamics package mainly designed for simulations of proteins, lipids and nucleic acids.

• OpenMM - High performance toolkit for molecular simulation including extensive language bindings for Python, C, C++, and even Fortran.

• MDTraj (⭐533) - Analysis of molecular dynamics trajectories.

Resources / Courses

• Learncheminformatics.com - "Cheminformatics: Navigating the world of chemical data" courese at Indiana University.

Resources / Blogs

• PubChem Blog - News, updates and tutorials about PubChem.

• The ChEMBL-og blog - Stories and news from Computational Chemical Biology Group at EMBL-EBI.

• ChEMBL blog - ChEMBL on GitHub.

• SteinBlog - Blog of Christoph Steinbeck, who is the head of cheminformatics and metabolism at the EMBL-EBI.

• chem-bla-ics - Blog of Egon Willighagen, who is an assistant professor at Maastricht University.

• steeveslab-blog - Some examples using RDKit.

2. Awesome Pixel Art

Tutorials / Animation

• Walking animation cycle in games

3. Awesome Ffmpeg

JavaScript

• gif-extract-frames (⭐20) - Extracts frames from GIFs including inter-frame coalescing.

4. Awesome Unity

Tweening

• GoKit (⭐574) - An open source, lightweight tween library aimed at making tweening objects dead simple.

5. Awesome Nodejs

Packages / Functional programming

• Kefir.js (⭐1.9k) - Reactive library with focus on high performance and low memory usage.

Packages / Command-line utilities

• oclif (⭐8.9k) - CLI framework complete with parser, automatic documentation, testing, and plugins.

Packages / Hardware

• gps (⭐249) - NMEA parser for handling GPS receivers.

Packages / Web frameworks

• Nest (⭐66k) - Angular-inspired framework for building efficient and scalable server-side apps.

Packages / Text

• i18next (⭐7.6k) - Internationalization framework.

Packages / Math

• multimath (⭐70) - Core to create fast image math in WebAssembly and JS.

Packages / Parsing

• fast-xml-parser (⭐2.5k) - Validate and parse XML.

Packages / Network

• netcat (⭐415) - Netcat port in pure JS.

Packages / Authorization

• CASL (⭐5.8k) - Isomorphic authorization for UI and API.

Packages / Job queues

• bee-queue (⭐3.7k) - High-performance Redis-backed job queue.

Packages / Serialization

• snappy (⭐480) - Native bindings for Google's Snappy compression library.

• compactr (⭐101) - Implementation of the Compactr protocol.

Packages / Miscellaneous

• env-dot-prop (⭐33) - Get, set, or delete nested properties of process.env using a dot path.

Resources / Books

• Node.js in Action

6. Awesome No Login Web Apps

Document Editors / Markdown

• StackEdit.io - Rich in-browser markdown editor that works offline.

Utilities (uncategorized) / Others

• Daily Todo - Simple todo list maker.

7. Awesome Salesforce

Table of Contents / Packages and Libraries supporting salesforce

• R.apex (⭐80) - Functional library for Apex. This library, inspired by Ramda.js, offers a bunch of utility functions to manipulate Apex collections, as well as extensive support for functional programming.

8. Awesome Swift

App Store

• merchantkit (⭐1.1k) - A modern In-App Purchases management framework for iOS.

9. Awesome Diversity

Organizations

• Q-Space - Queer and feminist maker space located in Beijing, China, providing a learning space and community actions for change.

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• Next: May 02, 2018